Welcome to Home page of EbolaVCR



Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
AntigenVP40
StrainBundibugyo Ebola Virus (BDBV)
Number of strain5
Gene IDgi_302371216
Protein IDYP_003815434.1
Mapped EpitopeVisualize
Sequence conservationVisualize Alignment
IDstartPeptideCTLMHC I allelesMHC I allele CountHLA allelesHLA allele Count MHC II allelesMHC II allele CountB cell epitopeInterferon-gamma inducerInterleukin-4 stimulator
4108Bundibugyo Ebola Virus (BDBV)55 ADDNIDHPS NHLA-B*37011NA0NA0Y0.39
4084Bundibugyo Ebola Virus (BDBV)31 ASGPNFPAP YMHC-Db revised1HLA-A*0203, HLA-A*0301, HLA-Cw*0401, H2-Db, H2-Dd, H2-Kb, H2-Kd, H2-Ld, HLA-G, H-2Qa, Mamu-A*0111NA0Y-0.45
4109Bundibugyo Ebola Virus (BDBV)56 DDNIDHPSH NNA0NA0NA0Y0.26
4113Bundibugyo Ebola Virus (BDBV)60 DHPSHTPTS NHLA-B*3801, MHC-Dd2NA0NA0Y-0.21
4349Bundibugyo Ebola Virus (BDBV)296 DPISQGDLT NHLA-B*3501, HLA-B*4403, HLA-B*5101, HLA-B*5102, MHC-Ld5NA0NA0Y-0.05
4098Bundibugyo Ebola Virus (BDBV)45 DTPSNSLRP NNA0NA0NA0Y0.56
4263Bundibugyo Ebola Virus (BDBV)210 HPKLRPILL YHLA-B*0702, HLA-B14, HLA-B*3501, HLA-B*3701, HLA-B*51, HLA-B*5101, HLA-B*5102, HLA-B*5103, HLA-B*5301, HLA-B*5401, HLA-B60, HLA-B7, HLA-B8, HLA-Cw*0401, MHC-Dd, MHC-Ld16HLA-A*0301, HLA-Cw*0401, H2-Db, H2-Dd, H2-Kb, H2-Kd, H2-Ld, HLA-G, H-2Qa, Mamu-A*0110NA0Y-0.99
4191Bundibugyo Ebola Virus (BDBV)138 LGPGIPDHP NMHC-Dd1NA0NA0Y-0.36
4342Bundibugyo Ebola Virus (BDBV)289 LPKYIGMDP NHLA-B*511NA0DRB1_15061Y-0.30
4095Bundibugyo Ebola Virus (BDBV)42 MMSDTPSNS NNA0NA0DRB1_0301, DRB1_0305, DRB1_0306, DRB1_0307, DRB1_0308, DRB1_0309, DRB1_0311, DRB1_0401, DRB1_0421, DRB1_0426, DRB1_110711Y0.25
4156Bundibugyo Ebola Virus (BDBV)103 QKTYSFDST NHLA-A20 Cattle1NA0NA0Y-0.18
4085Bundibugyo Ebola Virus (BDBV)32 SGPNFPAPD NMHC-Dd1NA0NA0Y-0.66
4082Bundibugyo Ebola Virus (BDBV)29 STASGPNFP NNA0NA0NA0Y-0.64
4083Bundibugyo Ebola Virus (BDBV)30 TASGPNFPA NHLA-B*0702, HLA-B*5101, HLA-B*51033NA0NA0Y-0.47
4099Bundibugyo Ebola Virus (BDBV)46 TPSNSLRPI NHLA-B*0702, HLA-B*3501, HLA-B*51, HLA-B*5101, HLA-B*5102, HLA-B*5103, HLA-B*5301, HLA-B*5401, HLA-B7, HLA-Cw*0401, MHC-Kk, MHC-Ld12NA0NA0Y0.72
4243Bundibugyo Ebola Virus (BDBV)190 TWTDDTPTG NNA0NA0NA0Y0.23
4153Bundibugyo Ebola Virus (BDBV)100 VADQKTYSF NHLA-A1, HLA-B*3801, HLA-B*4403, HLA-B*51, HLA-B*5301, HLA-B*58016NA0NA0Y-0.44